MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Proteus mirabilis
19428wB5_irhom_Sw
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 61
bases: 3,945,692 bps
CDS: 3,505
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,596
Total number of protein coding genes annotated/found:
3,505
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5038|JADGLF010000001.1
SEQF5038_01440
Genome Viewer
NA
AA
390/130
710234-709845
IS200/IS605 family transposase ISSen6
SEQF5038|JADGLF010000001.1
SEQF5038_01439
Genome Viewer
NA
AA
1665/555
709629-707965
Protein UshA
SEQF5038|JADGLF010000001.1
SEQF5038_01438
Genome Viewer
NA
AA
480/160
707362-707841
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
SEQF5038|JADGLF010000001.1
SEQF5038_01437
Genome Viewer
NA
AA
810/270
706505-707314
hypothetical protein
SEQF5038|JADGLF010000001.1
SEQF5038_01436
Genome Viewer
NA
AA
1530/510
704850-706379
hypothetical protein
SEQF5038|JADGLF010000001.1
SEQF5038_01435
Genome Viewer
NA
AA
2955/985
701560-704514
Copper-exporting P-type ATPase
SEQF5038|JADGLF010000001.1
SEQF5038_01434
Genome Viewer
NA
AA
402/134
701425-701024
HTH-type transcriptional regulator CueR
SEQF5038|JADGLF010000001.1
SEQF5038_01433
Genome Viewer
NA
AA
522/174
700537-701058
Inner membrane protein YbbJ
SEQF5038|JADGLF010000001.1
SEQF5038_01432
Genome Viewer
NA
AA
924/308
699611-700534
Protein QmcA
SEQF5038|JADGLF010000001.1
SEQF5038_01431
Genome Viewer
NA
AA
858/286
698714-699571
Chaperedoxin
SEQF5038|JADGLF010000001.1
SEQF5038_01430
Genome Viewer
NA
AA
786/262
697843-698628
Putative oxidoreductase SadH
SEQF5038|JADGLF010000001.1
SEQF5038_01429
Genome Viewer
NA
AA
582/194
697211-697792
Thioesterase 1/protease 1/lysophospholipase L1
SEQF5038|JADGLF010000001.1
SEQF5038_01428
Genome Viewer
NA
AA
687/229
697192-696506
Lipoprotein-releasing system ATP-binding protein LolD
SEQF5038|JADGLF010000001.1
SEQF5038_01427
Genome Viewer
NA
AA
2442/814
696509-694068
hypothetical protein
SEQF5038|JADGLF010000001.1
SEQF5038_01426
Genome Viewer
NA
AA
1026/342
692943-693968
Low conductance mechanosensitive channel YnaI
SEQF5038|JADGLF010000001.1
SEQF5038_01425
Genome Viewer
NA
AA
1269/423
691597-692865
hypothetical protein
SEQF5038|JADGLF010000001.1
SEQF5038_01424
Genome Viewer
NA
AA
1068/356
690406-691473
N5-carboxyaminoimidazole ribonucleotide synthase
SEQF5038|JADGLF010000001.1
SEQF5038_01423
Genome Viewer
NA
AA
522/174
689888-690409
N5-carboxyaminoimidazole ribonucleotide mutase
SEQF5038|JADGLF010000001.1
SEQF5038_01422
Genome Viewer
NA
AA
723/241
689033-689755
UDP-2%2C3-diacylglucosamine hydrolase
SEQF5038|JADGLF010000001.1
SEQF5038_01421
Genome Viewer
NA
AA
495/165
688526-689020
Peptidyl-prolyl cis-trans isomerase B
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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